CoAS_V1IS1_08

  • Home
  • CoAS_V1IS1_08
Popular Article
 
Status of Whole Genome Sequencing in Fisheries and Aquaculture
Gowhar Iqbal , Showkat Ahmad Dar and Yaqoota Maqbool
 
Abstract
Whole genome sequencing (WGS), is the process of determining the entirety or nearly the entirety of the DNA sequence of an organism's genome at a single time in a short span of time. Whole genome sequencing of a given species is a fundamental tool to address some important issues in aquaculture, which are critical for sustainable and profitable aquaculture. The development of whole genome sequencing in aquaculture is very quick. However, no good correlation exists between an organism's body size or complexity and its genome size. In the case of Labeo rohita the DNA was sequenced using Illumina and Oxford Nanopore Technologies (ONT) platforms. The draft whole-genome sequences of over 24 species have been published, and they can be served as reference genomes for downstream studies on important issues related to aquaculture and fisheries. NGS has various applications in aquaculture. With the rapid advance of NGS technologies and bioinformatics analysis of large sequencing data, the development of whole genome sequencing in aquaculture is very quick
 
Keywords
Whole genome, Aquaculture, NGS, Genome-Wide Association Study, Human Genome Project
 
Corresponding author
Gowhar Iqbal
 
References
 Yano, K; Yamamoto, E; Aya, K; Takeuchi, H; Lo, PC;Hu, L; Yamasaki, M; Yoshida, S; Kitano, H; Hirano, K; Matsuoka, M (2016). "Genome-wide association study using whole- genome sequencing rapidly identifies new genes influencing agronomic traits in rice".Nature Genetics. 48 (8)
Gilissen (2014). "Genome sequencing identifies major causes of severe intellectual disability". Nature. 511 (7509): 344–7.
van El, CG; Cornel, MC; Borry, P; Hastings, RJ; Fellmann, F; Hodgson, SV; Howard, HC; Cambon-Thomsen, A; Knoppers, BM; Meijers-Heijboer, H; Scheffer, H; Tranebjaerg, L; Dondorp, W; de Wert, GM (2013). "Whole-genome sequencing in health care. Recommendations of the European Society of Human Genetics". European Journal of Human Genetics.
Mooney, Sean (2014). "Progress towards the integration of pharmacogenomics in practice". Human Genetics. 134 (5)
Yue, G.H. and Wang, L., (2017). Current status of genome sequencing and its applications in aquaculture. Aquaculture, 468,.337-347.
 
Published online
17th June, 2023
 
How to Cite the Article
Iqbal et al., (2023) Status of Whole Genome Sequencing in Fisheries and Aquaculture. Chronicle of Aquatic Science 1(1): 40-44
 
Copyright
This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. 
 

Iqbal et al., 2023

File Action
Iqbal et al., 2023 Download